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MIB Panels

Overview

Microscopy Image Browser (MIB) provides a set of panels to assist with image processing, segmentation, and analysis.

Image document view

MIB3 is built on MATLAB's AppContainer framework, which gives every panel a consistent set of layout controls:

  • Resizable — drag any panel border to redistribute space between panels.
  • Collapsible — click the panel title bar to collapse it to a slim strip, freeing space for the image area.
  • Moveable — panels can be dragged to any edge of the MIB window, rearranged, or floated as independent windows, letting you build a layout optimised for your screen and workflow.

Panels

  • Datasets: manage up to 10 open dataset buffers per set; switch between them, duplicate, sync or link views, and set the memory access mode.
  • Directory Contents: navigate your files and folders, select images to load, options to switch between interchangeable panels using dropdown menus.
  • Segmentation: suite of tools for segmenting images, including 3D ball, brush, and advanced AI-based segmentation (e.g., Segment Anything Model).
  • Selection and View Settings: manipulate the Selection layer (add, subtract, replace, erode, dilate) and control layer visibility, color channels, and contrast.
  • ROIs: define and manage Regions of Interest for focused analysis or measurements.
  • Fiji Connect: integrate with Fiji (ImageJ) for additional processing capabilities, bridging MIB with external tools.

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