mibDeepStoreLoadImages.m File Reference

supporting function for mibDeepController load image function for the imagedatastore More...

Functions
function imOut =	mibDeepStoreLoadImages (fn, getDataOptions)
	supporting function for mibDeepController load image function for the imagedatastore

Detailed Description

supporting function for mibDeepController load image function for the imagedatastore

Function Documentation

mibDeepStoreLoadImages()

function imOut = mibDeepStoreLoadImages	(		fn,
			getDataOptions )

supporting function for mibDeepController load image function for the imagedatastore

Parameters

fn	[string] with the full filename
getDataOptions	additional structure with options .mibBioformatsCheck - [logical] switch indicating use (true) or not use (false) of the BioFormats file reader .BioFormatsIndices - [numerical] index of series to be used with the BioFormats reader or index within TIF file for standard reader .Workflow - [string] used workflow, taken from obj.BatchOpt.Workflow{1} .randomCrop - []

Required fields of getDataOptions:

References amiraMesh2bitmap(), and mibLoadImages().

Referenced by mibDeepController.evaluateSegmentation(), matReadInstanceLabels(), mibDeepActivationsController.mibDeepActivationsController(), mibDeepAugmentSettingsController.previewAugmentations(), mibDeepController.processImages(), mibDeepController.startPrediction2D(), mibDeepController.startPrediction3D(), and mibDeepController.startPredictionBlockedImage().

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