Microscopy Image Browser 2.91
MIB
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Amira Directory Reference
Directory dependency graph for Amira:
ImportExportTools/Amira

Files

 amiraLabels2bitmap.m
 Converts Amira Mesh Labels to bitmap matrix, for Amira ver. 5.2.2.
 
 amiraLandmarks2points.m
 read amira landmark coordinates
 
 amiraMesh2bitmap.m
 Converts Amira Mesh to bitmap matrix [1:height, 1:width, 1:colors, 1:no_stacks].
 
 amiraMeshSlice2bitmap.m
 Extracts a slice or its subsection from Amira Mesh to bitmap matrix [1:height, 1:width, 1:colors].
 
 bitmap2amiraLabels.m
 Convert matrix [1:height, 1:width, 1:no_stacks] to Amira Mesh Labels.
 
 bitmap2amiraMesh.m
 Convert bitmap matrix to Amira Mesh binary format.
 
 getAmiraMeshHeader.m
 Get header of Amira Mesh file.
 
 graph2amiraSpatialGraph.m
 generate Amira Spatial Graph Ascii file
 
 ib_amiraImportGui.m
 ib_amiraImportGui function is responsible for a dialog to advanced opening of Amira Mesh files.
 
 points2amira.m
 generate AM file for Amira with cloud of points, their labels and values
 
 points2amiraLandmarks.m
 generate amira Hypersurface Ascii file in: filename - filename to save data points - a matrix with points [point number, x, y, z] options - a structure with additional options .overwrite - 1-automatically overwrite existing files .format - a string with format: binary or ascii
 
 points2psi.m
 generate PSI file for Amira the file contains cloud of points, their labels and values
 
 surf2amiraHyperSurface.m
 generate amira Hypersurface Ascii file