bitmap2amiraLabels.m File Reference

Convert matrix [1:height, 1:width, 1:no_stacks] to Amira Mesh Labels. More...

Functions
function result =	bitmap2amiraLabels (filename, bitmap, format, voxel, color_list, modelMaterialNames, overwrite, showWaitbar, extraOptions)
	Convert matrix [1:height, 1:width, 1:no_stacks] to Amira Mesh Labels.

Detailed Description

Convert matrix [1:height, 1:width, 1:no_stacks] to Amira Mesh Labels.

Function Documentation

bitmap2amiraLabels()

function result = bitmap2amiraLabels	(		filename,
			bitmap,
			format,
			voxel,
			color_list,
			modelMaterialNames,
			overwrite,
			showWaitbar,
			extraOptions )

Convert matrix [1:height, 1:width, 1:no_stacks] to Amira Mesh Labels.

Parameters

filename	filename for Amira Mesh file
bitmap	the dataset, [1:height, 1:width, 1:no_stacks]
format	[optional], saving format: 'binaryRLE', 'ascii', 'binary' (default)
voxel	[optional], a structure with voxel size: voxel.x - physical width of a voxel voxel.y - physical height of a voxel voxel.z - physical thickness of a voxel voxel.minx - minimal X coordinate of the bounding box voxel.miny - minimal Y coordinate of the bounding box voxel.minz - minimal Z coordinate of the bounding box
color_list	[optional], a matrix with colors for the materials as [materialId][Red, Green, Blue] from 0-1; can be empty
modelMaterialNames	[optional], cell array with names of the materials, can be empty
overwrite	[optional], if 1 do not check whether file with provided filename already exists
showWaitbar	[optional], if 1 - show the wait bar, if 0 - do not show
extraOptions	[optional], a structure with additional paramters .TransformationMatrix - a string with the transformation matrix

Return values

result

result of the function run, 1 - success, 0 - fail

Required fields of voxel:

Required fields of extraOptions:

References max.

Referenced by mibChopDatasetController.chopBtn_Callback(), mibCropObjectsController.cropBtn_Callback(), mibCropObjectsController.generatePatches(), mibImage.saveMask(), and mibImage.saveModel().

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