mibSetImarisDataset.m File Reference

Send a dataset from MIB to Imaris. More...

Functions
function connImaris =	mibSetImarisDataset (mibImage, connImaris, options)
	Send a dataset from MIB to Imaris.

Detailed Description

Send a dataset from MIB to Imaris.

Function Documentation

mibSetImarisDataset()

function connImaris = mibSetImarisDataset	(		mibImage,
			connImaris,
			options )

Send a dataset from MIB to Imaris.

Parameters

mibImage	an instance of mibImage with the dataset to export to Imaris
connImaris	[optional] a handle to Imaris connection
options	an optional structure with additional settings (for example, when is called from mibRenderModelImaris.m) .type -> [optional] type of dataset to send (image, model, mask, selection) .modelIndex [optional] index of a model material to send, could be NaN .mode -> [optional] type of mode for sending (3D, 4D) .insertInto -> [optional] a cell with index where to insert the Z-stack, when -1 replaces the whole dataset; .lutColors -> [optional] a matrix with colors for the color channels .showWaitbar -> logical show or not the waitbar

Return values

connImaris

a handle to Imaris connection

Required fields of mibImage:

Required fields of options:

Required fields of connImaris:

Examples:

options.lutColors = obj.mibModel.displayedLutColors;   // call from mibController; get colors for the color channels 

obj.connImaris = mibSetImarisDataset(obj.mibModel.I{obj.mibModel.Id}, obj.connImaris, options);     // call from mibController; send dataset from matlab to imaris 

References mibImage.getBoundingBox(), mibImage.getData(), mibImage.getDatasetDimensions(), max, mibImage.meta, mibConnectToImaris(), mibInputDlg(), min, mibImage.model, mibImage.modelMaterialColors, mibImage.modelMaterialNames, mibImage.pixSize, mibImage.slices, mibImage.time, mibImage.viewPort, and mibImage.Virtual.

Referenced by mibController.menuFileExportImage_Callback(), mibRenderModelImaris(), and mibModel.modelExport().

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