MIB3 — Microscopy Image Browser 3¶

MIB3 is a MATLAB application for interactive processing, segmentation, and visualization of 2-D to 4-D microscopy datasets. It runs as a MATLAB script or as a compiled standalone Windows application built on the AppContainer framework (ribbon UI, docked document panels).

Author: Ilya Belevich, University of Helsinki
Source: github.com/Ajaxels/MIB3

Architecture overview¶

MIB3 follows an MVC pattern implemented with MATLAB packages:

Package	Purpose
`+models`	Central application state (`models.MibModel`); fires events that controllers observe.
`+controllers`	UI controllers — ribbon, panels, tools, dialogs.
`+views`	App Designer `.mlapp` components and the main `views.MibView` window.
`+core`	Dataset and image data classes; undo, labels, annotations.
`+io`	Image I/O factory (loaders and savers for all supported formats).
`+utils`	Dialogs, defaults, deep-learning helpers, and standalone utility functions.
`+deepmib`	Supporting functions for DeepMIB

API Reference